Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815526.1_cds_XP_016498373.1_12409
CDS Infomation

[gene=LOC107817112] [db_xref=GeneID:107817112] [protein=CDK5RAP3-like protein] [protein_id=XP_016498373.1] [location=complement(join(386002..386124,386767..386899,387256..387464,387687..388223,388326..388478,388573..388708,388815..388909,389078..389172,390823..390957,391066..391126))] [gbkey=CDS]
Sequence

ATGCAGAACCAAGACGATATTCGTAATCTTCCAATCGACATAGCATTCGCTCGCCTCGGA
GAATGGTTGGCTGATCGGAAGAGAATTCCGGCGGATTGGCGGAAGCGACTTGCGGCCGTG
AGAGCTAAGATTACGACGTCGTTTGCTTCGCTGCCTAAAGACATTGATCCTTACTTTCAC
ACTCTTGATGTTGAAGGGATCGGTTATTTGGAAGCCAAAAAAATATATGAGATTCTTCTG
AAGTCAACTCCAGAAAGCCGTAATATTTTTGGTCGGCTTTCAGGTGATGCTGGTGTTTGG
GAAGCAATAGTGCGTGCCTATGAGAAGGAATACATTTTCCTTGGTGAAGCTGCTCAGACT
ATGGTCCAAAATGTTAACTATGAGATCCCCTATCAGAAGAAGCAGATTCAGAAGACACAG
CAGCAACTAGCTGAATTGGAGCGCAAAGAAACTGATATAAAAAGAAATGCAGCTGTTTCG
GCGTCTAAATATGTAGAGGCTTGTCAGGAGCTGGGCCTGCAGGGAATAAATGTAAGGTCA
GAACTTTTAGAAACTGCCTCTAAATCTCTTCCAACCACATTTAGCAGAATCTTGGAAGTA
CTTAATGGTGATTCTGTCTCACGGGCTACTGAGTTTTACTCAGATTTCGTCAAAGATGCT
CATACAGAAAAGGATAAAACCGCTGCTGTTGTGTTACCAAATCTGAGGAGTGTTTGTGAA
AGTCCCCCTTCGACTGATGTTTCCATTAGCTCTGAAGTATTGGAGGTTATGAAAGCTCAA
GGAGGATATAATGACTTAGGTCAAATGACTGTAGAAACTGATATTGCAGCTGATGGGATT
GACTGGGATATTACTTTAGATAGCTCTCAAATTGATTGGGACATTGGCACTGTGGAAGAA
ACAGAAGAAAATGGAAATGGTTTGGGTCCCTATGAGATTGTTAATGCAAGCGATATTTTG
CCATCTCCTCGTAATGACAGTGTAGAATCTCATCAGACCTCAAAGGAAGAAGGATTCTCA
GCTCCTGAGGTCTCTGCATCAGAAATATCTTGGGATATAAGTGTTGACAATCCTCTAGTT
GTTGTGATTGAAGAAGACAGTTCACAAAATAATGCTGCGGAACTACGTTCTCTTCAAAAC
AATTTAACTGCAGAGAGGAGTCCTCTACTAGAGACAGAGTACAGGAATAAGATACTTGAT
GACTTATTTGAGGTGAAAGCATTCTTGAATCAACGGTTGATTGAGCTAAGGAACGAAGAA
ACTACGTCTTTACAACATCAAGTCCAAGCAGTTGCTCCGTTTGTTCTGCAGCAGTACTCT
TCGGATATAATTCAGACAATGCTATCTGACGTTTCCTTAGCCATTTCATTGCTTACAAAT
AGGAAAACAAGGGACATGATCATGATCCTCAACTCCAAAAGATTTTTGGATCGGTTGGTC
AATACTTTGGAGGAGAAAAAGCGTCAGGAAGCCAAGTTAAAGGACGGATTAAAGGACTTG
TCTGCTAGGCGTATGGAACTTCAGAATTCGATGTCTTCATCTTGGCCAAAACAAGAAGCA
GCTATTGCGAAGACCAGGGAACTGAAGAAACTCTGTGAGAGTACACTTTCATCCATGTTT
GACGGACGGCCTGTCAATATCATAGGAGAGATTAATACATTGTTAATTAGTAGCTAG

Peptide Sequence

PEP ID

XP_016498373.1
PEP Infomation

PREDICTED: CDK5RAP3-like protein [Nicotiana tabacum]
Sequence

MQNQDDIRNLPIDIAFARLGEWLADRKRIPADWRKRLAAVRAKITTSFASLPKDIDPYFH
TLDVEGIGYLEAKKIYEILLKSTPESRNIFGRLSGDAGVWEAIVRAYEKEYIFLGEAAQT
MVQNVNYEIPYQKKQIQKTQQQLAELERKETDIKRNAAVSASKYVEACQELGLQGINVRS
ELLETASKSLPTTFSRILEVLNGDSVSRATEFYSDFVKDAHTEKDKTAAVVLPNLRSVCE
SPPSTDVSISSEVLEVMKAQGGYNDLGQMTVETDIAADGIDWDITLDSSQIDWDIGTVEE
TEENGNGLGPYEIVNASDILPSPRNDSVESHQTSKEEGFSAPEVSASEISWDISVDNPLV
VVIEEDSSQNNAAELRSLQNNLTAERSPLLETEYRNKILDDLFEVKAFLNQRLIELRNEE
TTSLQHQVQAVAPFVLQQYSSDIIQTMLSDVSLAISLLTNRKTRDMIMILNSKRFLDRLV
NTLEEKKRQEAKLKDGLKDLSARRMELQNSMSSSWPKQEAAIAKTRELKKLCESTLSSMF
DGRPVNIIGEINTLLISS

Transcript Sequence

Gene sequence data has not been registered.